ProteinFishing

Download and Copy ProteinFishing.pdb and ProteinFishing.cfg into your working directory and type:

>modelX -f ProteinFishing.cfg

Or check the command line tab
>modelx --command=ProteinFishing --pdb=ProteinFishing.pdb --residue-begin=89 --residue-end=94 --hook-mol=C --fisher-mol=A --dubiety=0.4 --pep-mismatches=6 --contact-th=10 --cbeta-angles=10 --sections=37 --fit-threshold=1 --fit-level=1 --biassed=false --database-name=FishXDB --database-server=localhost --database-user=modelx --database-pass=modelx